Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015886073.1_cds_XP_016440192.1_35672
CDS Infomation

[gene=LOC107765997] [db_xref=GeneID:107765997] [protein=rust resistance kinase Lr10-like] [protein_id=XP_016440192.1] [location=complement(join(58940..60087,60282..60356,63062..63794))] [gbkey=CDS]
Sequence

ATGGGAATTTGTTTGTTTGATCAGTGGCCAGTGGGAGGATATAATATGACTTTCACTTCT
TTTGTATGCTTTCTTCTGATCTGTTACTTAGTTCAGACAAAGGGCAGAAGTGATTCAACT
TGTCCAAAGTCATTTTCATGTGGAAATCTTACTGACCTGAGCTTTCCTTTCTCTCTTTCC
ACACAATCTGACTGTGGATTTCTGTCCATGTCTGGTTGTAATGCTAAACCATTTCCAATA
ATCCAACTACTTCCTGGAGGAGATTGGTACTATGCTTTAGAGAAGCATAATTCATCAGTT
TTGCTTGGCGACCCGAAGCTTCAAATGACGTTGAGGCAACGCGATTGCGAAGCTTTTAAC
AAGAATTTCTCCCTTCCAAACTCTCCTTCTATTTCTTTCACTACTCTTTCACTTCAAAAT
ATCTTCAAATGTAATAGTACCAATCATAATATTACGCAGAAGATGAAATATCATTATGAA
ATGTATGATGGATGTGATGGCTTCACCATATACTACAAGATTGATGATGAAGACGTTTTA
GCAGGCAATCTTCCTGCTAACTGTTCACTTATCAAATTGCCATTTGACAAGTTATCAAAT
GATGGTGATTTGTTCAACTTGTTAGGTCCTGAATTTCTAGTAGAATGGAAGCTGTCTGAT
GACTGTTACCAATGTCACTATAGTGGAGGTCAATGCCAGACTGATATTACCAACAAATTT
CTTTGTCACACAGATGTTAGCAATATAACAGCGGCAGGTACATCAAAAAGGGGTCATCTC
CGGACATCCTGGTTCATTGTAGCCACAGGTACATTCTTCTCTTGTATTGGACTGCTGGTT
TTACTCTTCTACTTCAGAGAAAAGATTTTGTGGTACAAATACCTAAAATTTTGGGAATCT
AATGCTGAGGATCACCAAAATATCGAAACATTTCTAATGAATTATGGGTCATATTCTCCA
AAGAGATACAGCTATTCAGAAGTCAAAAGAATCACCGGTCACTTCAAAAACAAACTAGGC
CAAGGAGGATGTGGTAATGTATACAAAGGAAGATTGCATAACGGGAAGCATGTGGCAGTG
AAGCTTGCGAATGGAAAAGGCAGTGCTGAAGTATTCATTAACGAGGTTGCAAGTATTAGC
AAGACATCACATGTTAACATCGTGAGCCTTGTGGGATTTTGTTTTGAGGGTCGCAGAAGA
GCTCTTGTTTATGAATTCATGCCAAATGGATCTCTTGAAAAGTTTATCTATGAGGAAAGA
TCCAACAGAGTTCGCCAATTGAGTTGGCCAATATTATACAAAATTGCACTAGGCATTGCT
CGTGGATTGGAGTACTTACATCGTGGTTGTACCACTCGGATTTTGCATTTTGATATAAAG
CCTCACAATATCCTGCTTGATGACGATTTTTGTCCTAAGATTTCCGACTTTGGACTTGCC
AAACTTTGCATGAAAAAGGAGAGCGTTGTGTCAATGTTAGGTGCACGAGGGACTATTGGT
TATATAGCTCCGGAAATAGTTTGCAGAAACTTAGGAGGTGTCTCTCACAAGTCTGATGTC
TATAGCTACGGAATGATGGTGCTAGAGATGGTTGGAGGAAGAAAAAATGTTGATGTTGAA
GTTGACCGTACAAGTGAAATCTACTTCCCACACTGGCTCTATCGACGAATTGAACTAGAC
GAAGAGCTCCAACTAATCGGGATAATGAATGAATCGGAGAAAGAATGCGCAAGAAAGATG
GTGTTAGTGAGTTTATGGTGTTTACAGACTGATCCCTCAAATCGACCATCTATGACTAAA
GTTGTGGAAATGTTAGAAGGGAACCAAGTCTATTTGAAAATACCTCCCAAGCCTTACCTA
TATCCTGCCTCAAGATCAGAGGTAGATTCATCAGTAGTAGAACCGACCCAATCTTTATTT
GTTGATATGTCAGCTAATATTTTGTATGAAATTTAA

Peptide Sequence

PEP ID

XP_016440192.1
PEP Infomation

PREDICTED: rust resistance kinase Lr10-like [Nicotiana tabacum]
Sequence

MGICLFDQWPVGGYNMTFTSFVCFLLICYLVQTKGRSDSTCPKSFSCGNLTDLSFPFSLS
TQSDCGFLSMSGCNAKPFPIIQLLPGGDWYYALEKHNSSVLLGDPKLQMTLRQRDCEAFN
KNFSLPNSPSISFTTLSLQNIFKCNSTNHNITQKMKYHYEMYDGCDGFTIYYKIDDEDVL
AGNLPANCSLIKLPFDKLSNDGDLFNLLGPEFLVEWKLSDDCYQCHYSGGQCQTDITNKF
LCHTDVSNITAAGTSKRGHLRTSWFIVATGTFFSCIGLLVLLFYFREKILWYKYLKFWES
NAEDHQNIETFLMNYGSYSPKRYSYSEVKRITGHFKNKLGQGGCGNVYKGRLHNGKHVAV
KLANGKGSAEVFINEVASISKTSHVNIVSLVGFCFEGRRRALVYEFMPNGSLEKFIYEER
SNRVRQLSWPILYKIALGIARGLEYLHRGCTTRILHFDIKPHNILLDDDFCPKISDFGLA
KLCMKKESVVSMLGARGTIGYIAPEIVCRNLGGVSHKSDVYSYGMMVLEMVGGRKNVDVE
VDRTSEIYFPHWLYRRIELDEELQLIGIMNESEKECARKMVLVSLWCLQTDPSNRPSMTK
VVEMLEGNQVYLKIPPKPYLYPASRSEVDSSVVEPTQSLFVDMSANILYEI

Transcript Sequence

Gene sequence data has not been registered.